It could be an organization similar to the Akatsuki, but with a different goal. Instead of collecting tailed beasts, they are focused on conquering villages. Their army would be made up of powerful and diverse fighters, and Naruto would have to face their leader, who has some sort of special power or ability that makes them a formidable foe.
In the fanfic, Naruto might destroy the army in a very unique way. Instead of using his typical Rasengan or Shadow Clone Jutsu, he could discover a new power within himself. Maybe he unlocks a special form of Sage Mode that gives him the ability to control the elements in a completely different way, allowing him to take on the army with ease.
Well, he might use his powerful jutsu like the Rasengan. He could also summon his toads to help him out in the battle against the army. Maybe he uses his shadow clone technique to confuse the enemy and then strike them when they're vulnerable.
Yes, there might be such fanfics out there. In the Naruto fandom, with a large number of fans creating various types of stories, it's possible that some would write a story where Naruto destroys Sasuke in a way that could be seen as Sasuke - bashing. However, these kinds of fanfics may not be in line with the overall spirit of the original work which focuses on their complex relationship and growth.
Sasuke might be able to stop Naruto. They have a long - standing relationship and Sasuke has always been Naruto's equal in terms of power. He could use his Sharingan to try and break whatever is controlling Naruto or just fight him head - on and appeal to their old friendship.
The theme of justice might be present as well. If 'kina' is something evil or causing harm in the fanfic, Naruto's destruction of it can be seen as an act of justice. Also, the fanfic could explore the theme of sacrifice. Naruto might have to sacrifice something, like his time, energy or even relationships to be able to destroy 'kina' successfully.
It could be that Naruto is possessed by an evil spirit. This spirit wants to destroy the Leaf Village for its own reasons. Naruto, under its control, would first cut off the village's supply lines, making it difficult for the villagers to get food and resources. Then, he'd start attacking the ninja in the village one by one. He might even use his Nine - Tails chakra in a very destructive way, not caring about the harm it would cause to the place he once called home.
In a 'naruto destroys konoha fanfic', one possible plot could be that Naruto is pushed to the edge by the villagers' constant mistreatment and the hidden secrets of Konoha's leadership. He discovers some dark deeds that the village elders have been involved in, like using him as a pawn without his knowledge. This betrayal could fuel his anger and lead him to decide to take revenge on Konoha.