It could be Mew. Mew is known for its ability to transform and has a very mysterious nature. If Ash was Mew's son, he might inherit some of that mystery and the power to communicate with Pokemon in unique ways.
Arceus could be his parent. As the creator of the Pokemon world, Arceus would pass on some truly god - like powers to Ash. This could make Ash a key figure in some grand prophecy in the fanfiction, with powers that are both a blessing and a curse as he tries to fit in with the normal Pokemon - training world.
Maybe Lugia. Lugia is a very powerful and majestic legendary. If Lugia was Ash's parent, Ash might have an innate connection to the sea and flying - type Pokemon. He could also have the power to calm storms and other natural disasters, which would be really cool in his Pokemon - training adventures.
One of the Legendary Pokemon could be Giratina. Despite its somewhat dark and otherworldly nature, Giratina might be intrigued by Ash's light - heartedness and his ability to make friends with all kinds of Pokemon. Dialga and Palkia could also be part of the harem. Dialga, with its control over time, might see Ash as an important factor in the future of the Pokemon world. Palkia, in charge of space, could be interested in how Ash navigates different regions and spaces in his journey. And don't forget about Ho - Oh. Ho - Oh is a symbol of hope and might see Ash as a bringer of hope in the Pokemon world, thus joining his harem.
The plot might involve Ash being hunted by villains who want to use his connection to the legendary Pokemon. His friends in the fanfiction could be either helping him keep his secret or be in danger because of it. Also, his journey to become a Pokemon master could be intertwined with his search for his parent's true identity and purpose, which was perhaps hidden from him for his own safety.
Articuno, Zapdos, and Moltres are quite common. Their elemental powers and the mystery surrounding them make for great fanfiction material. Ash might encounter them during his travels and have to either help them or face off against them in some way.
Arceus is quite popular. Given that it's considered the creator of the Pokemon universe in the official lore, it often has a significant role in fanfictions. Mewtwo is also very common. Its powerful psychic abilities and complex backstory make it a favorite for fanfic writers to explore. Another popular one is Lugia. With its majestic appearance and its connection to the sea, it's often a central figure in many stories.
Obviously, Ash is one of the main characters. He's the protagonist who has a passion for pokemon and is always eager to become a pokemon master. And the legendary pokemon he encounters or befriends would also be important characters. For instance, if it's Lugia, Lugia would play a major role in the story as it's a very powerful and mysterious pokemon.
Obviously, the Legendary Pokemon would be a main character. It could be a Pokemon like Mewtwo, who is often depicted as having a complex personality. It might start off as a mysterious and powerful entity that Ash has to befriend or battle against.
The appeal lies in seeing Ash in new and exciting situations. With legendaries involved, his journey becomes more epic. It's like taking the underdog story of Ash in the anime and supercharging it.
In Ash-centered legendary Pokemon fanfiction, often Ash has extraordinary adventures. He might form unique bonds with legendary Pokemon that are not seen in the official storylines. For example, he could befriend a Mewtwo and together they face off against an evil organization trying to clone more powerful Pokemon. These fanfictions allow for a lot of creativity, expanding on Ash's character and his relationships in the Pokemon world.
Obviously, Ash is one of the main characters. Since it's about him being a legendary Pokemon in this fanfiction, he's central to the story.
It could be Team Rocket. They are always after rare and powerful pokemon. In this fanfiction, they might have a new and devious plan to steal the legendary pokemon that Ash is trying to catch. Their comical yet persistent attempts to thwart Ash would add an interesting dynamic to the story.