One possible reason could be a strange side - effect of his connection with the Nine - Tails. Since he has the Nine - Tails' chakra within him, in the fanfiction world, this chakra might start to physically manifest in the form of fox ears and a tail during his time in Wave. Maybe the unique environment or a specific event in Wave triggered this abnormal transformation.
In a fanfiction, Female Naruto with fox ears and tail might have a special connection to the Nine - Tailed Fox spirit. The fox ears and tail could be a sign of a deeper bond that she has with the tailed beast. This could lead to new jutsu or abilities that are related to both her femininity and the fox - like nature. For example, she could create illusions that are fox - themed or use her tail as a weapon in a more graceful way than normal attacks.
One idea could be that Naruto has to constantly hide his ears and tail from the villagers at first. This could add an extra layer of secrecy and danger to his early life, as if he's discovered, he might face more severe persecution than in the original story. Another plot idea is that his fox features give him unique abilities, like enhanced senses, which he has to learn to control.
Naruto's daily activities would be affected. For instance, he would need to hide his new features, which could be difficult. Hunting and stealth missions would become more challenging as his new appendages might give him away. Also, his relationship with his Sensei might change. His Sensei would need to figure out how to train him while dealing with these new physical aspects. His combat style would also have to adapt. He could use his new fox - like abilities, such as enhanced hearing with the ears, but he would also need to learn how to control his balance better with the tail.
His training would be different because he might have to constantly worry about his ears and tail being noticed. He'd probably have to be more careful during physical training, like when doing acrobatics or sparring, to avoid accidentally showing his tail. Also, he might face some teasing or even bullying from the other students, which could make it harder for him to focus on his studies.
One origin could be a curse placed on Naruto. In the Naruto universe, there are many powerful curses. This curse could be related to the nine - tailed fox's history or some ancient feud. It might be that a long - forgotten clan or entity has put this curse on Naruto as a form of revenge or to serve their own dark purposes. Or it could be a natural evolution of Naruto's connection to the nine - tailed fox as he reaches a new level of power, but his body isn't fully able to handle it yet, so it manifests in these physical changes.
One possible plot could be that Naruto discovers a new jutsu or is under a curse that causes him to grow fox ears and a tail. This new form might make his friends initially confused or even a bit scared. But as the story progresses, he learns to control this new part of himself and uses it to his advantage in battles, like having enhanced senses from the ears and better balance with the tail.
His relationship with Sasuke could be affected. Sasuke might be initially intrigued by Naruto's new look but also see it as a sign of Naruto getting stronger without him. This could fuel his rivalry even more.
The fanfiction could be set in an alternate universe where having fox ears and tail is normal for some ninjas. Female Naruto would be part of a group that is trained specifically to use their fox - like features in combat. There could be rival groups with different animal - like traits, and she has to fight for the honor of her fox - clan.
One idea could be that Naruto discovers his fox ears and tail have special powers. For example, the ears can detect danger from afar, like an enhanced sense of hearing. The tail could be used for balance during his high - speed ninja moves, making him even more formidable in combat.