Another possibility is that the main antagonist is a rogue ninja who has a vendetta against Naruto. This ninja blames Naruto for something that happened in the past and uses Naruto's banishment to get closer to him and try to kill him. He could be constantly hunting Naruto down, which adds to the drama and action in the fanfiction.
Maybe the main antagonist is an outside force that sees Naruto's banishment as an opportunity to attack Konoha. They manipulate Naruto, making him think that Konoha doesn't deserve his help. However, as Naruto discovers their true intentions, he has to decide whether to help Konoha or let it fall. So this outside force that tries to use Naruto's situation is the main antagonist.
It could be a hidden group within Konoha that was behind Naruto's banishment. They might be afraid of his growing power and influence. This group could work in the shadows to stop Naruto from ever returning to Konoha and regaining his status.
Perhaps Danzo could be the main antagonist. He was always a bit of a shadowy figure in the original Naruto series. In this fanfic, he might see Naruto and Sasuke as a threat to his own control over Konoha. So, he uses his influence to have them banished. He could be secretly working with external forces to further his own agenda while keeping Naruto and Sasuke away from Konoha.
It could be a rogue ninja from within Konoha who has embraced the 'darkness' fully and wants to reshape the village according to his own twisted ideals.
It could be Danzo. He has always been a shadowy figure with his own agenda. He might see Naruto as a threat to his control over the village and engineer his banishment.
It could be a powerful Thalmor agent. The Thalmor are often seen as the bad guys in Skyrim, and if Naruto shows up, they might see him as a threat to their plans of domination. They could use their influence to get Naruto banished and then try to hunt him down.
The main antagonist could be a powerful Sith - like figure who has infiltrated the ninja world. This character might be manipulating events from the shadows, causing the village to suspect Naruto and leading to his banishment. They could have their own motives for wanting to take over the ninja world, like using its chakra for their own dark purposes.
Maybe the main antagonist is a group within Naruto's own village. The elders or some of the more conservative clans who banished Naruto in the first place. They fear that if Naruto returns as the banished emperor, he will change the power structure that they have been maintaining for so long. So they do everything they can to stop him from coming back, even if it means allying with outside forces.
A powerful Hollow could be the main antagonist. This Hollow could sense Naruto's unique energy and see him as a threat to its plans of taking over Karakura. It might constantly target Naruto and his new friends, trying to eliminate them one by one.
The main antagonist could be a power - hungry elder in Temari's own village. This elder might see Temari as a threat to their authority, especially if she has been getting too much influence or support from other ninja. So, they frame her for a crime that leads to her banishment.
It could be a rogue ninja from a neighboring village who wants to obtain Naruto's Rinnegan for himself. This ninja has been secretly observing Naruto and sees the potential of the Rinnegan. He then tries to hunt Naruto down during his banishment to take the power.
It could be a corrupt elder in Konoha. They might be power - hungry and see Naruto as a threat to their control. So they manipulate the situation to make Naruto the enemy.