Kawaki makes his appearance in Boruto manga at a specific point, but I can't recall exactly. You might want to check the official manga sources for the precise chapter.
It could also be related to a prophecy or a pre - determined fate in the fanfic's plot. There might be some kind of dark prophecy that says Kawaki has to kill Naruto to prevent a greater evil. Or perhaps Kawaki is being controlled by an external force that has a vendetta against Naruto and uses Kawaki as a tool to carry out the murder.
In such a fanfiction, perhaps Kawaki is driven by some extreme ideology. Maybe he believes Naruto's way of peace is a weakness and decides to take him out to change the ninja world in a more radical way.
Many of Naruto's friends and allies would be filled with rage. Characters like Sasuke would probably seek immediate revenge on Kawaki. The other villages might also see this as a sign of instability in the Hidden Leaf and could either try to take advantage or offer help depending on their relationships with the Leaf. And the younger generation, like Boruto, would be deeply affected. He would have to deal with the loss of his father and might struggle with his own identity and purpose in a world without Naruto.
In the 'boruto kills naruto fanfiction', a motive could be a power struggle. Boruto might believe that Naruto's power is holding back the village's growth or his own potential. He could think that by eliminating Naruto, he can bring about a new era of power in the Hidden Leaf. Also, it could be out of desperation. If Boruto is in a situation where he believes that killing Naruto is the only way to save someone he loves, like his mother or a friend, he might take such a drastic step.
In a 'kawaki kills naruto' fanfic, the story would likely take a very dark turn. The characters would be forced to reevaluate their relationships and loyalties. Sasuke, for example, would be deeply affected as Naruto was his closest friend. He might be torn between seeking revenge and trying to understand what drove Kawaki to such an act. The new generation of ninja, like Sarada and Mitsuki, would also be involved in the aftermath. They might be caught in the middle of the conflict between Boruto and Kawaki, trying to find a way to restore peace while dealing with their own feelings of loss and confusion.
The story would likely be filled with chaos. The Hidden Leaf would be in shock and mourning. Boruto would probably become an outcast. He might be hunted by those loyal to Naruto. People like Sasuke would surely seek revenge. Boruto would then either have to flee or try to prove his innocence if he was framed or explain his actions if he had a reason.
The villagers would likely be in shock. Naruto is a beloved figure, but killing his own son would be a very controversial act. Some might turn against Naruto, believing he has gone too far. Others might understand his reasons if they knew the full story, but still struggle with the morality of it.
Another reason could be related to a prophecy. There might be a prophecy that Boruto will bring great destruction in the future, and Naruto, as the Hokage, feels it's his duty to prevent this at all costs. He might think that by killing Boruto, he can change the course of fate and protect the people he loves and the entire ninja world.