One possible plot could be Naruto using his new Sage of Six Paths powers to take on the Akatsuki one by one. He could start with Hidan and Kakuzu, quickly dispatching them with his enhanced speed and strength. Then, he moves on to Deidara, outmaneuvering his explosive attacks with his own agility. Another plot might involve Naruto infiltrating the Akatsuki's hideout alone, using his shadow clones as decoys. He could then surprise Pain and defeat him in an epic battle, showing his growth as a ninja.
A great plot for this fanfiction could be that Naruto discovers a new jutsu specifically designed to counter the Akatsuki's powers. He first tests it on Sasori, easily breaking through his puppet defenses. As he progresses, he uses his unwavering determination and the power of friendship (yes, it's a bit cheesy but it works in Naruto) to defeat the rest of the Akatsuki. He could also have some sort of moral victory over Itachi, showing that his way of protecting the village is different but equally valid.
Pain would be one of the most challenging. His Rinnegan gives him a wide range of powerful abilities like the Six Paths of Pain. Naruto would have to figure out how to counter each of those paths and find a way to reach the real Pain. Itachi is also tough. His Sharingan and genjutsu skills are top - notch. Naruto would need to break free from his genjutsu and then find a way to fight back against his fire - based attacks.
One interesting plot could be a story where Naruto tries to understand the Akatsuki's motives better and ends up befriending some of its members. This challenges his previous beliefs about them being all - evil.
Another plot might involve Naruto learning the secrets of the Akatsuki members. For example, he discovers how each member got their powers and tries to use that knowledge to his advantage. He could also form unexpected alliances within the Akatsuki, like with Sasori or Hidan, which would lead to some really cool and unpredictable story developments.
A common plot is Naruto using his friendship bonds to gain an edge. For example, in many fanfics, his bond with Sasuke becomes a key factor. Sasuke may return to Konoha and fight alongside Naruto against the Akatsuki. Another popular plot is Naruto unlocking some new, super - powerful form. Maybe a combination of all his different power - ups throughout the series that makes him nearly invincible against the Akatsuki.
One possible interesting plot could be Obito revealing his true identity to the Akatsuki members. It would create a huge shock and change the dynamics within the group.
He might become a hero in the eyes of some people. But he could also be feared by others who see his power as a threat.
One possible plot could be that Harry discovers a dark secret about the Ministry of Magic, like they are using dark magic themselves to control the wizarding population. So he decides to expose them and in the process, the chaos that ensues leads to the destruction of magical Britain as it was known.
One interesting Naruto Akatsuki Naruto fanfiction could be one where Naruto joins the Akatsuki but secretly plans to reform them from within. He uses his unique understanding of the ninja world and his strong will to gradually change the Akatsuki members' views on things like war and peace.
Some fanfictions might explore the Akatsuki in an alternate universe. For instance, in a world where the Akatsuki are the heroes instead of the villains. They could be fighting against a greater evil that the regular ninja villages are unaware of, and Naruto could end up joining them to fight this common foe.
Well, in this fanfiction, it could be that Akatsuki has a change of heart. Some members might realize that Naruto represents a hope for the ninja world in a different way than they initially thought. So they step in to save him when he's in a really tough situation, like being trapped in a powerful jutsu or surrounded by a large number of enemy ninjas. They use their own unique skills, like Kisame's water jutsu or Itachi's Sharingan abilities to fight off the threats.