In this kind of fanfic, perhaps there has been a series of events that gradually turn the villagers against Naruto. For example, some powerful enemies have been secretly spreading lies and manipulating the villagers' emotions. Naruto, being the target, has no chance to explain himself clearly. And as the situation worsens, the villagers' hatred grows until they take extreme actions.
Well, one way could be that the villagers' long - hidden fear and jealousy of Naruto's power finally boil over. Maybe they believe some false rumors that Naruto is about to destroy the village. So, in a fit of panic, they turn on him all at once and overpower him.
In this fanfiction scenario, it could be that an enemy uses some sort of mind - control jutsu on Naruto's family. The family, under the control of this jutsu, doesn't recognize Naruto as their own and kills him. This would add an element of tragedy as Naruto would be killed by those he loves and trusts the most without them being fully in control of their actions. It would also open up the story for a revenge plot by Naruto's friends or other allies against the enemy who controlled his family.
Perhaps his parents were misled to believe that Naruto was a threat to the village. They might have been fed false information about Naruto being a potential danger, like being a vessel for a great evil. So, in an attempt to protect the village they loved, they made the tragic decision to kill him.
In such a fanfic, the plot might involve Naruto finally realizing the unjust treatment he received from the villagers in his past. He could start by using his powerful ninja skills, which he has honed over the years. Maybe he begins with small acts of disruption, like causing minor chaos during village festivals. Then, as his revenge plan unfolds, he might target the village's infrastructure, such as disabling the security systems. However, this would likely be a complex story as Naruto also has friends in the village who would try to stop him and make him see reason.
One way could be by exploring misinformation. Maybe Naruto was told lies about his parents' actions that made him believe they were bad. For example, if he was misled to think his father was responsible for some great tragedy in the village.
One possible plot twist could be that Naruto discovers one of the villagers was being controlled by a hidden enemy. This enemy could be using the villager's fear and hatred of Naruto to try and get rid of him. Another could be that Naruto's near - death experience makes the villagers realize their mistake and they start to protect him instead, leading to a change in the whole village - ninja relationship in the story.
The fanfiction could explore the backstory of why the villagers torture Naruto. It could be that some evil influence, like a hidden group within the village or a curse, is making them act this way. Naruto, being the strong - willed person he is, might try to uncover this mystery. He would use his detective skills, similar to when he solved various missions. As he gets closer to the truth, the torture might intensify. But Naruto's resolve would not break. He could also find unexpected allies, perhaps some of the older ninja who remember a time before the village turned against Naruto, and they would help him fight against the forces that are causing this unjust treatment.
The plot could be that Naruto discovers Pikachu in the Hidden Leaf Village. Maybe it was lost from the Pokémon world. Naruto, being the kind-hearted ninja he is, decides to take care of Pikachu. They then go on adventures together in the Naruto universe, with Pikachu using its electric attacks to help Naruto in battles against the bad guys.
The fanfic could start with Naruto being exposed to a strange chakra during a battle with an unknown foe. This chakra mutates his own and results in him getting the Rinnegan. As a result, he gains the ability to understand and communicate with all forms of life, which is one of the Rinnegan's powers. Naruto decides to use this new power to broker peace between different ninja clans and villages. He uses the Animal Path to summon various powerful beasts to act as ambassadors of peace. However, there are still some rogue elements in the ninja world who see Naruto's new power as a threat and try to eliminate him, leading to an all - out battle where Naruto must use his combined powers, including his new Rinnegan abilities, to defend himself and his ideals.
Maybe the Ninken is a special one with some sort of prophecy attached to it. Naruto gets the Ninken and at first doesn't understand its true significance. But as time goes on, he realizes that the Ninken is key to unlocking a new power within himself. The Ninken also has its own backstory that is slowly revealed as the story progresses, like it was once part of a great ninja's team and has been waiting for the right person to come along, which is Naruto.
One possible plot could be that Naruto discovers a strange gun in a hidden dungeon during one of his missions. He initially has no idea how to use it but as he studies it, he realizes it has some unique powers. Maybe it can shoot chakra - based bullets that can immobilize enemies stronger than him, which changes the way he approaches battles.