Perhaps in this fanfiction, Naruto has been influenced by some external force. It could be a dark entity that has corrupted his view of Team 7. He might see them as a hindrance to achieving some greater, more self - centered objective. Also, it could be that Naruto has had some sort of personal revelation about his past and blames Team 7, or certain members of it, for things that he now believes held him back in the past.
One possible reason could be a misunderstanding. Maybe his team made a decision without consulting him, which made him feel left out and thus led to hatred. For example, if they took on a mission without him, Naruto, who values being part of the team, might feel betrayed.
One possible reason could be that Naruto discovers some long - hidden secrets about Minato that he feels betrayed by. For example, if he found out Minato had made a deal that affected Naruto's life negatively in some way, like with the Kyuubi. Maybe Naruto feels that Minato sacrificed him for the greater good of the village without really considering his future or feelings.
One possible reason could be a misinterpretation of Kushina's actions. Maybe some events were presented in a way that made Naruto think she was neglectful or had made bad decisions in the past.
One reason could be that it doesn't respect the original story's intention. The original Naruto story is about growth, friendship, and ninja skills. Harem fanfiction for Team 7 just throws in romantic elements that Naruto may find disrespectful to the real story.
One possible reason could be that in this fanfic's unique plot, Jiraiya might have made a decision that Naruto strongly disagreed with. For example, Jiraiya could have been involved in some political intrigue within the ninja world that Naruto thought was against his ideals of justice and peace.
Perhaps Naruto discovers some dark secrets about Konoha that go against his values. Like if the village has been involved in unethical practices that he can't overlook. This could be things like using underhanded tactics against other villages, which would make Naruto, with his strong sense of justice, turn against Konoha.
It could also be due to some external influence. Perhaps an enemy manipulated Naruto's mind in the fanfiction, making him see his family in a negative light. This enemy might have used some form of mind - control or false memories to turn Naruto against his family.
Perhaps he discovered some dark secrets about Konoha that made him lose faith in the village. For example, if he found out that the village leaders were involved in unethical or immoral activities that were against his values, it could make him hate Konoha. He might also feel betrayed if his so - called friends turned their backs on him for some reason.
It could be that Naruto has a different view of leadership than Sarutobi. Naruto might see Sarutobi's leadership as being too passive or too focused on maintaining the status quo. He, with his more energetic and revolutionary ideas, may resent Sarutobi for not being more progressive in making the village a better place for everyone, including himself.
One possible reason could be a misinformation plot. Maybe in the fanfiction, Naruto has been led to believe that Yondaime had some dark secrets or did something bad to his family that he discovers later in the story.