In some fanfictions, Ginny might be written to betray Harry because of a prophecy. The prophecy could mislead her into thinking that Harry was going to bring doom, and so she decides to act against him to prevent that. It's a different way of looking at their relationship compared to the original story, where their bond was based on love and trust.
She might hate it because it could change the way people see her character. In the original story, she is a strong and independent person, but fanfiction might portray her in a wrong way.
It could be due to jealousy. Perhaps Ginny has been spending a lot of time with another character, and Harry misinterprets their relationship, leading to his anger. In fanfiction, the writers often play with such emotions to create drama.
One possible reason could be miscommunication. Maybe Ginny feels neglected by Harry because he's so caught up in his own heroic deeds and doesn't pay enough attention to her. So she might seek comfort or excitement elsewhere.
One possible reason could be a misunderstanding. Maybe Ginny is under the influence of a powerful dark magic that makes her act against Harry without her full control. For example, a powerful mind - controlling spell could be involved.
One reason could be that the fanfiction is set in a different universe where the characters' personalities are slightly altered. So, this 'new' Harry just doesn't click with Ginny in that version. For instance, if the fanfic is a darker take on the story, Harry might be more jaded and not open to a relationship with Ginny.
In some fanfictions, Ginny may reject Harry because she wants to focus on her own personal growth. She might feel that a relationship with Harry at that time would hold her back from achieving her own goals, like becoming a great Quidditch player or an accomplished witch in her own right. So, she decides to reject him to pursue her own dreams first.
Power could be a reason. If there's a chance for Ron and Hermione to gain a great deal of power by turning against Harry, some fanfictions might explore this. For instance, a new dark power might offer them something they've always desired, like the ability to reform the wizarding world in their own image. They might think Harry would oppose this, so they betray him to get what they want.
One possible reason could be jealousy. If Harry gets more attention or power than the Weasleys, they might feel envious and turn against him.
One possible reason could be a growing apart due to their different career paths. Harry, being deeply involved in the wizarding world's security and Ginny having her own Quidditch career. Another reason might be the stress of living in the public eye. Their relationship may not be able to withstand the constant scrutiny and pressure from the wizarding community.
One possible reason could be a misunderstanding. Maybe Harry was wrongly accused of something, and Ginny's temper got the better of her. For example, if there were false rumors about Harry being unfaithful in the fanfiction world.