In many fanfictions, Naruto might use new jutsus or a deeper understanding of his own power. Maybe he taps into a more powerful form of the Nine - Tails' chakra and combines it with his Sage Mode in a unique way to overpower Pain.
A theme that often comes up is his physical pain and how he endures it. This can be used to show his strength and tenacity. For example, in a battle - themed fanfiction, he endures great pain but still manages to fight for the sake of his village. Also, the theme of self - discovery through pain is common. As he experiences pain, he learns more about himself and his limits.
In an 'Obito kills Kakashi' fanfiction, it could start with a long - standing grudge. Maybe Obito discovers some new information that he believes Kakashi has been hiding from him all these years. This enrages him so much that he decides to take revenge and kills Kakashi in a fit of rage during a battle.
One reason could be a misunderstanding. Maybe some false information makes Naruto think Kakashi is a traitor to Konoha. So, in a fit of rage, he kills Kakashi. Another reason could be related to power. If Naruto becomes obsessed with power and Kakashi tries to stop him from going down a dark path, Naruto might lash out and kill him.
Some fans would be really shocked and sad. Kakashi is a very popular character, and his death at the hands of Obito would be a huge blow to many. They might feel angry towards the author for creating such a tragic scenario.
The theme of sacrifice could also be present. Both characters are willing to sacrifice for their causes. In the context of a yaoi fanfiction, this could translate into sacrifices for each other. For example, Pain might sacrifice his original plans for world domination for Kakashi, or Kakashi might put his village - related duties on hold to be with Pain, exploring the lengths they would go for their relationship.
Another possible fanfiction could be centered around Kakashi's pain from his past traumas, like the loss of his father. It could show how these past experiences resurface when he faces a new threat in the village. The story could detail how he overcomes this pain by finally coming to terms with his past and using it as a source of strength.
Well, Kakashi might be really engrossed. Since Jiraya is a great writer in the Naruto world, Kakashi could be learning a lot from those novels. Maybe he finds some new ninjutsu concepts or interesting stories about the shinobi world in them.
Well, if there is a 'naruto kills kakashi fanfiction', it would be a very different take on the Naruto universe. It could be set in a world where Naruto has been corrupted by an evil force. This force could be manipulating Naruto's emotions and memories, making him think Kakashi is a threat. In the original series, they have a strong bond, so this would be a very controversial and unexpected plot.
One possible motive could be mind control. Maybe an enemy manages to take over Kakashi's mind and forces him to harm Naruto. Another could be a misunderstanding. For example, if Naruto was thought to be possessed by a powerful and dangerous entity that Kakashi believed could only be stopped by killing Naruto.