In this fanfiction, it might be that Anakin has a vision of the future where the younglings grow up to be great Jedi and save the galaxy. So, he defies Palpatine's orders. He could enlist the help of some loyal clones or other Jedi who have managed to escape the initial purge. He then takes the younglings to a remote planet where they can be safe and trained in secret.
One common storyline could be Anakin's struggle with his darker side while interacting with the younglings. For example, in some fanfics, Anakin might be forced to protect the younglings from an external threat, which tests his loyalty to the Jedi Order. Another storyline could involve Anakin teaching the younglings, which shows his relationship with the next generation of Jedi. There are also fanfics where the younglings sense Anakin's internal conflict and try to help him, adding an interesting dynamic to the story.
It could be Palpatine. Since Anakin is going against his wishes by saving the younglings, Palpatine would see this as a threat to his plans. He might send more clone troopers or even some of his dark side minions to stop Anakin.
Fanfics often depict Anakin's interaction with younglings as complex. Sometimes he is kind and patient, like a big brother or a mentor. He might teach them lightsaber techniques or how to meditate. But other times, his darker side can peek through. For example, he could get frustrated with their lack of progress, and the readers can see the internal struggle within him as he tries to control his emotions.
One of the best is his fall to the dark side in 'Revenge of the Sith'. We see his inner struggle with his fear of losing Padmé, and how Palpatine manipulates him. It's a tragic story of a once - great Jedi being consumed by his emotions.
Anakin Skywalker's story is one of great tragedy. Born into slavery, he had a difficult start. As a Jedi, he was in a relationship with Padmé Amidala, which was against the Jedi Code. His fall to the dark side was gradual. Palpatine manipulated him. He committed many atrocities as Darth Vader. But deep down, there was still good in him, which was shown when he sacrificed himself to destroy the Emperor.
One great 'Anakin Skywalker Fanfic' is 'The Chosen One's Redemption'. It shows Anakin's journey towards redemption in a really interesting way. It delves deep into his inner turmoil and how he tries to make up for his past mistakes.
In fanfiction, Anakin's character can be expanded through alternate timelines. Let's say a fanfic has him not turning to the dark side. We can then see how his character would have developed as a powerful Jedi without the influence of the Sith. It also allows for exploring his relationships with other characters like the clones in ways that the movies didn't fully cover. Writers can create scenarios where Anakin has to lead the clones in different battles and how that shapes his leadership skills and his view of the war.
One great Anakin Skywalker fanfiction is 'The Chosen One's Redemption'. It delves into Anakin's journey towards redemption after his fall to the dark side. It shows his internal struggles and how he tries to make amends for his past actions. Another is 'Anakin in Exile' which imagines Anakin living in seclusion and reflecting on his life. It gives a deeper look into his character outside of the main Star Wars narrative.
One interesting Anakin Skywalker fanfiction could be one where he doesn't turn to the dark side. In this story, perhaps Padmé is able to convince him more firmly of the light. Another could be a time - travel fanfiction where Anakin goes back in time and tries to prevent the events that led to his downfall. There are also fanfictions that explore his relationship with Obi - Wan in more depth, like their adventures together as master and apprentice before the Clone Wars.