Another idea is a crossover of the Upside Down and the Weirdness of Gravity Falls. Imagine Eleven using her powers in Gravity Falls and discovering new and strange things about the town. The kids might explore areas where the laws of physics seem to be a mix of both their worlds. For example, they could find a portal that leads to a place that has elements of both Hawkins and Gravity Falls.
A memorable moment could be when the kids from both shows combine their unique skills. For instance, when Dustin's knowledge of science and Dipper's knowledge of the supernatural come together to solve a mystery that involves both the Upside Down and the mysteries of Gravity Falls. It shows how different perspectives can lead to great solutions.
Another great concept is a crossover where Eleven's powers are mistaken for some kind of witchcraft by the Supernatural universe. Sam and Dean initially think she's a threat but then realize she's actually a powerful ally against a common enemy. They could be facing a powerful being that can manipulate time and space, and Eleven's telekinetic and telepathic abilities are crucial in defeating it.
A Stranger Things crossover fanfic with the Avengers would be really exciting. The Hawkins kids could team up with the Avengers to fight off the Demogorgon which has somehow become a threat to the entire world. Or a crossover with Doctor Who. The Doctor could land in Hawkins and help the gang deal with the Upside Down, bringing his unique time - traveling and alien - fighting skills. Also, a crossover with the Ghostbusters would be fun. They could come to Hawkins to deal with the strange entities from the Upside Down using their proton packs.
One idea could be a Gravity Falls and Steven Universe crossover. Dipper and Mabel could meet Steven and the Gems. Maybe they'd team up to solve a mystery that involves both Gravity Falls' strange phenomena and the Gem-related threats. It would be cool to see how the different magical elements interact.
One great Stranger Things crossover fanfiction is the one that combines it with 'Harry Potter'. It imagines the characters from Stranger Things attending Hogwarts. The way the Upside Down is incorporated into the magical world is really interesting. It adds a new layer of mystery and danger.
One idea could be that the characters from Rugrats somehow end up in Gravity Falls. Maybe the babies follow a strange glowing bug that turns out to be a magical creature from Gravity Falls. And Tommy could befriend Dipper, and they start exploring the mysteries of Gravity Falls together. The Rugrats' naivete could add a new comical element to the Gravity Falls mysteries.
One idea could be that Dipper and Mabel from Gravity Falls end up in the SVTFOE universe. They could team up with Star to battle some sort of interdimensional evil that threatens both their worlds. Maybe they discover a connection between the strange creatures in Gravity Falls and the magic in SVTFOE.
One idea could be that the Demogorgon from Stranger Things somehow ends up in Derry from It. The Losers' Club and the kids from Hawkins could team up to fight it. They would have to combine their different skills and knowledge of the supernatural.
One idea could be that the Losers' Club from 'It' somehow ends up in Hawkins, Indiana, during the events of 'Stranger Things'. They could team up with the kids from 'Stranger Things' to fight a new, combined threat that has elements of both the Upside Down monsters and Pennywise's terrors. For example, the Mind Flayer could merge with Pennywise in some way, creating an even more terrifying entity.
One idea could be that the characters from Gravity Falls end up in the FNAF world. Dipper might be intrigued by the mystery of the haunted animatronics and try to solve it using his journal. Mabel could befriend the more friendly - looking animatronics, like Chica, and try to make them cute accessories. Another plot could involve the FNAF villains getting loose in Gravity Falls and the Pines family having to use the town's unique magic to stop them.