Some fans also like to pair the female protagonist with Marie. Marie has her own mystery and connection to the story. The two of them could have a relationship where they help each other discover more about themselves. Maybe the female protagonist could help Marie come to terms with her identity and in return, Marie could share some of her unique knowledge about the Midnight Channel and Inaba.
A popular pairing is with Yu. They both are the main characters and have a lot in common in terms of their roles in the story. Their relationship could be explored in a romantic or a deep platonic way. Another good pairing could be with Naoto. Since Naoto is also a very unique character, the two of them could bond over their different perspectives and skills, and there could be a great dynamic between them.
Yosuke could be a good pairing too. They have a fun, friendly relationship in the game, and in fanfiction, it could develop into something more. They could support each other through the tough times in Inaba and grow closer as a result. Also, Kanji might be an interesting choice. Kanji's tough exterior and the female protagonist's understanding nature could create an interesting relationship where they learn from each other.
Ruby and Joker could be a great pairing. Ruby's enthusiasm and determination combined with Joker's cool - headed leadership skills would make for an interesting dynamic. They could learn from each other's combat styles and ways of thinking.
Chie Satonaka from Persona 4 and Ann Takamaki from Persona 5. They both have strong personalities and are very passionate about their causes. Chie with her love for kung - fu and Ann with her modelling career. They could bond over their determination and share their combat skills and life experiences with each other. It would be fun to see how they interact in a crossover scenario.
Yu Narukami and Joker would be an interesting pairing. Yu is the calm and collected leader of the Investigation Team, while Joker is the charismatic leader of the Phantom Thieves. They could exchange ideas about leading their respective groups and how to deal with the Shadows. Their different fighting styles and Persona abilities could also make for some great team - up moments in battle.
One popular pairing is Joker with characters from the Persona series like Akechi. Their complex relationship in the game makes for interesting crossovers. Another is Joker with characters from other RPGs, such as Link from The Legend of Zelda. It's cool to see how their different abilities and personalities interact. Also, Joker and characters from the Final Fantasy series like Cloud are quite popular.
Yukari (from Persona 3) and Chie (from Persona 4). Yukari is very outspoken and has a bit of a sarcastic side, while Chie is energetic and a bit of a tomboy. Their different personalities could lead to some really fun and comical interactions, especially when they're facing Shadows together or just hanging out in the school setting.
There's a fanfiction called 'A Female Protagonist's Tale in Persona 5'. In this, the author delves deep into how the female lead might handle the challenges of the Metaverse differently from the male lead. It also has some great character development moments for her, like when she forms new Personas.
There are fanfictions that put the female protagonist in alternate universes. She might be in a modern - day high school setting without the threat of Shadows, just living an ordinary life but still having the traits that made her so beloved in the game. Or she could be in a crossover with another game or series, like teaming up with characters from 'Persona 5' which would create really interesting dynamics.
Joker is often paired with the female protagonist. Their relationship can be explored in different ways, from being comrades in the Phantom Thieves to having a more romantic connection. Ryuji is also a popular choice as they can have a fun, energetic dynamic.
Makoto Naegi from Danganronpa and Yu Narukami from Persona. Makoto's determination and leadership skills could pair well with Yu's calm and collected nature. They could work together to solve the mysteries that occur when their worlds collide.
Ruby and Yu Narukami. Ruby is young and full of energy, always eager to fight for what's right. Yu is a calm and collected leader. Their different personalities would make for an interesting dynamic. Ruby could learn from Yu's more methodical approach to problem - solving, while Yu could be inspired by Ruby's unwavering determination.