The betrayal could also start from a personal grudge that Mirajane holds against Naruto, even if it's unfounded. It could be that she misinterprets Naruto's actions or words as an insult or threat to her or her loved ones. And then, in a moment of anger or confusion, she decides to betray him. This could lead to a series of events where Naruto has to deal with this unexpected betrayal and try to figure out how to resolve the situation.
In this fanfiction scenario, perhaps Mirajane has her own dark secrets or hidden motives that lead to her betraying Naruto. She might be seeking power and sees Naruto as an obstacle. Or, it could be related to loyalty to her own guild or group. If there are conflicting interests between Naruto's world and her world, she might choose to side against Naruto to protect her own people.
Naruto might initially be in shock. He's a person who values friendship highly, so being betrayed by Mirajane would be a huge blow. He'd probably first try to talk to her, to understand why she did it.
One possible plot could be that Naruto somehow ends up in the Fairy Tail world. He meets Erza and Mirajane. Naruto's ninja skills intrigue them. They could team up to fight a common enemy that threatens both the ninja world and the Fairy Tail world. Maybe Naruto teaches them some ninja techniques in return for learning some magic from them.
In this fanfiction, it might be that Sirzechs is being manipulated by some dark force. This dark force convinces Sirzechs that Naruto is evil. As a result, Sirzechs betrays Naruto. Naruto then has to not only deal with the betrayal but also figure out how to stop this dark force that is causing so much chaos and misunderstanding.
Perhaps in this fanfiction, Yugao is secretly working for a hidden organization that wants to get rid of Naruto. She betrays him by revealing his secrets or setting him up in dangerous situations. Naruto, being the kind - hearted person he is, initially doesn't want to believe she would do such a thing and tries to reason with her, but she is too far gone in her loyalty to the other side.
In this fanfiction, perhaps there's a power struggle. Naruto, being a powerful ninja, could be seen as a threat to the RWBY world's power balance. So, the RWBY characters, out of fear or a sense of self - preservation, betray him. They might think he'll disrupt their way of life or take over their territory.
One possible plot could be that Jiraiya is forced to betray Naruto due to some external threat. Maybe an enemy has captured Jiraiya's loved ones and threatened to kill them if he doesn't turn on Naruto. Jiraiya, in a difficult position, might have to pretend to be against Naruto to protect his loved ones while secretly trying to find a way to free both Naruto and his family from the enemy's clutches.
Well, one possibility could be that Mavis has some sort of hidden agenda. Maybe she's being controlled by a greater evil force that makes her turn on Naruto. It could also be a misunderstanding. For example, false information is spread about Naruto, and Mavis believes it without proper investigation. Another idea is that Mavis has a different view of the ninja world compared to Naruto, and their conflicting ideologies lead to her betraying him.
Well, it could be that Kurenai is somehow deceived into believing Naruto has done something really bad. Maybe she's tricked by an enemy who fakes evidence against Naruto. So, in her misunderstanding, she turns against him.
Well, it could be that they betray their village. Maybe they are tricked into believing false information about Konoha being corrupt. So they side with an enemy force, thinking they are doing the right thing.
Well, one possibility is that Naruto is framed for a serious crime he didn't commit. Maybe someone fakes evidence that he's been working with the enemies of the village. His friends, believing the false evidence, turn their backs on him. He then has to fight not only against the village's distrust but also to clear his name and find out who really set him up.